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Make’ing Your Dependencies Explicit
Make’ing Your Dependencies Explicit Posted by r.silva on … the commands to be run while making the input and output dependencies explicit. Enter Make. Make Make is a … to build the particular components (targets), from their dependencies [1]. Together we call the …
Read moreDefending your code against dependency problems
… Champions . Why it's important to take version dependencies into account A poor choice of dependent … to keep the development and intended deployment environment dependencies as similar as possible Do your best to avoid specific software version dependencies Try to develop your code in an operating …
Read moreSharing reproducible research – minimum requirements and desirable features
… declaration, proper commenting, appropriate definitions and dependencies, and a suitable readme file on how to get … such as so-called containerization solutions. Dependencies All software has a number of implicit and explicit dependencies to enable it to be built and run. A bash script …
Read moreUsing Make for reproducible scientific analyses
… documents, etc. - should be produced as well as their dependencies, or what files are needed to create them. … requiring instructions. Make automatically handles dependencies. When you have a complicated workflow, … specifies how to create a single target: target: dependencies... command The target is the …
Read moreWriting and using a software management plan
… each output (e.g. a specific user will review it); dependencies between outputs and with external dependencies; major risks that might impact on the … software will be produced by your project? What are the dependencies / licenses for third party code, models, tools …
Read moreDockter: A container image builder for researchers
… Uses package databases to determine package system dependencies and generate linked metadata (containerit does this for R) Installs language package dependencies quicker (which can be useful during research projects where dependencies often change) By default but …
Read moreReproducible Environments With Nix
… in isolation. Instead, it builds on top of a wide range of dependencies from compilers and language runtime … new/upgrading packages is a case of combining the required dependencies. Because they are isolated this becomes much … versions based on the package descriptions for these 4 dependencies. Nix packages are described in a …
Read moreArchiving code and software shared with research: journal, author and re-user perspectives
… Even if we can’t run code in real time, and even if dependencies disappear, the code itself should be possible … researchers who submit code to use sustainable (long-lived) dependencies, this has a positive and self-reinforcing … who submit code should attempt to understand which dependencies are stable (e.g. PyPl, MRAN) versus those with …
Read moreAutomating unit testing with Continuous Integration
… python-version: 3.9 - name: Install Python dependencies run: | python3 -m pip install … 3.9 Install the latest version of pip and our dependencies: it’s good practice to upgrade the version … is present first, then we use pip to install our package dependencies just as we could do on our own machine. We use …
Read moreWhat makes good code good at INTECOL13
… it more easily. Use open technologies, languages, dependencies . These are often available at lower cost, or …
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